Insertion junction: CLIP2.008702_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008702
Chromosome:chromosome 11
Location:1864578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467795 (1 of 1) K05853 - Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum (ATP2A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTGCATAGACGGCCAAACTCTACCTCCGCACTCTGGACTAGCGGGAT
Internal bar code:GGGAGTTTAACGTGAGATGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:150
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGAAAAGGGGAGGGAGG
Suggested primer 2:TTGGTTCAGTTTGGGCTGGT