Insertion junction: CLIP2.008707_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008707
Chromosome:chromosome 3
Location:4050050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171950 PPC2,PEPC2 (1 of 2) K01595 - phosphoenolpyruvate carboxylase (ppc); Phosphoenolpyruvate carboxylase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCCGGGGACCGTTGGAGGCCTTCAGTGAATGATAACTACGAACTAAA
Internal bar code:AATTGGACCTAGCACGCAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:263
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGACGTTGTTGGCCTTGG
Suggested primer 2:AAAAGCGGTAAGGTGAGGGG