Insertion junction: CLIP2.008707_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008707
Chromosome:chromosome 3
Location:4050062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171950 PPC2,PEPC2 (1 of 2) K01595 - phosphoenolpyruvate carboxylase (ppc); Phosphoenolpyruvate carboxylase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTATCTACGGTCTACACGGGCGGCCAAAAGCCGCGCCCGGGCAGCAA
Internal bar code:AATTGGACCTAGCACGCAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:449
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGCGGTAAGGTGAGGGG
Suggested primer 2:CTTGACGTTGTTGGCCTTGG