Insertion junction: CLIP2.008708_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008708
Chromosome:chromosome 17
Location:1176710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704400 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTTGATGAACTCGCTGTACAGCTGCAGGTTGCAGTCGGCGTTGCTGT
Internal bar code:CGTATCACTTCAGCAACGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5437
LEAP-Seq percent confirming:97.2727
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGGGATATGGGTACGG
Suggested primer 2:CAACCACCAGTGCGAGTAGT