Insertion junction: CLIP2.008714_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008714
Chromosome:chromosome 2
Location:1806654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086887 NUP98-96,NUP189 Nucleoporin 98-96; (1 of 1) K14297 - nuclear pore complex protein Nup98-Nup96 (NUP98, ADAR2, NUP116) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACTCCAGTGAATCACGGCCCTGCCCTGTGCAGGCTGCGGCCAAGCCT
Internal bar code:GAACCCGTCGATTTGTGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCATTACACGCCCAAACCGA
Suggested primer 2:AAGGCCAGTCCTGACATTGG