Insertion junction: CLIP2.008719_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008719
Chromosome:chromosome 10
Location:1381463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427850 (1 of 1) IPR000014//IPR000104//IPR013767 - PAS domain // Antifreeze protein, type I // PAS fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTTCTTACACAAGTACAGCCGACCCGTGGAGTGCACCGCGACGCTGC
Internal bar code:GCCTGTACAACTCCCGCACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1532
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATGTGAGCAGGTGGTGG
Suggested primer 2:GCTGCCTGCACCATTTTTCA