Insertion junction: CLIP2.008719_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008719
Chromosome:plastome
Location:10194
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCATACGAAAATTGGTATCTTTGTGTTAGCAAGGATCCAATATTTAT
Internal bar code:TGCCTATTTGTAGACTCTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCTTTCAGGCAACCCAA
Suggested primer 2:CTAGCGGGCAGTCACAAACT