Insertion junction: CLIP2.008723_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008723
Chromosome:chromosome 1
Location:4159713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027764 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGATGTGCAGCGCCAGACTGTGCGCAGGCCGACGACTGACCCCGACTA
Internal bar code:TTGGCGTGAGCGCGAGGTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:469
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGCCTCCCTGGACAGTA
Suggested primer 2:ATGAAGTGAAGTGCCGACGT