Insertion junction: CLIP2.008723_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008723
Chromosome:chromosome 1
Location:4159715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027764 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCGTCAGTCGTCAGCCATGTCCTTGCGTGCACGTGCTGGACGCCGGTC
Internal bar code:GTCCTGGATGACACAAATCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:922
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGTGAAGTGCCGACGT
Suggested primer 2:GGTAGCCTCCCTGGACAGTA