Insertion junction: CLIP2.008726_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008726
Chromosome:chromosome 1
Location:3789618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024750 STK (1 of 1) PF00059//PF00069//PF07714//PF14295 - Lectin C-type domain (Lectin_C) // Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // PAN domain (PAN_4); Serine/threonine protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCCGTCCACCAGCGTGTAGCAGCCCTGATAGCGAGCCGCCCCTGAC
Internal bar code:AGGCGAGGGAGAGGCGACTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2753
LEAP-Seq percent confirming:84.0909
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCTGACTTGATGTGGCT
Suggested primer 2:TACGTGTAGATGTCGCAGGC