Insertion junction: CLIP2.008727_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008727
Chromosome:chromosome 7
Location:944882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319150 PTP4 Protein tyrosine phosphatase; (1 of 2) PTHR10367 - MRNA-CAPPING ENZYME intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGAAACGGAATAAAACACAACCCCCCCCCCACACACACACCACTTCC
Internal bar code:TGGGTTGCCTATGTAGATACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGCCAATGCCATTCTA
Suggested primer 2:TGTCCTGCGCGTATTGTTCT