Insertion junction: CLIP2.008728_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008728
Chromosome:chromosome 11
Location:4136015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481250 (1 of 1) PTHR10992//PTHR10992:SF699 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCATGGCTCCCCGCACGCCCGCCGCTATGGCCGTGCAGTTGGTGGGGA
Internal bar code:TCTATACATGGTCATTTTATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:462
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCAGCCCAAACTAGCCC
Suggested primer 2:TCTTGGAGAAGTGGAACGCC