Insertion junction: CLIP2.008733_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008733
Chromosome:chromosome 17
Location:3781242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726800 (1 of 1) PTHR15975//PTHR15975:SF0 - UNCHARACTERIZED // CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGGGGCGGGTGCGCCGGGGGTGCTCTGGACGGGTGCTCCTGCTGGT
Internal bar code:CACATGCGGGCGATGTAGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1633
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAAGGTTGTTGGTCTG
Suggested primer 2:TCGTGCACCTGTACATCACC