Insertion junction: CLIP2.008736_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008736
Chromosome:chromosome 2
Location:3299683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097600 FKM2 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTGTCTGGGAGCTGCAGAGCCGTGTAGCCGCCGCGGCGCATGAGCGA
Internal bar code:AGACGATCGTTTCCTGCCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGTCAGTTGTTGTTGTC
Suggested primer 2:GTTGAGAGTAGCCAAGCGGT