Insertion junction: CLIP2.008737_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008737
Chromosome:chromosome 14
Location:2645788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625450 VTE3 MPBQ/MSBQ methyltransferase, chloroplastic; (1 of 1) 2.1.1.295 - 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase / MPBQ/MSBQ methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGTGCATTTCGGGAACGGGGACCATTGTCGCGTGCCACTCCGTTGTC
Internal bar code:GTACGGTCCCATTTCTTCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TACCATGCCTCGGCTTGTTT
Suggested primer 2:TCATCATCAGCTCATCCCGC