Insertion junction: CLIP2.008750_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008750
Chromosome:chromosome 2
Location:1795729
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800183 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACACACGTCCATTCACCAACGCCGCCCCACGCGTATCAGTTAACAGGC
Internal bar code:ATAGTATAAATCGATTGGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3620
LEAP-Seq percent confirming:8.82353
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGATTGCCAAGTTGAA
Suggested primer 2:ACAACGTACAGCTGGGGAAG