Insertion junction: CLIP2.008751_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008751
Chromosome:chromosome 6
Location:5061806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGATCGCTCCTCAACACTCCCCCCTCGAGCAGCACTCTATTGCTAGC
Internal bar code:ATAAATAGCCCAGAAGGTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1446
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACCCATTTTCCGAGCGT
Suggested primer 2:CACACATCCTCACACCCCTC