Insertion junction: CLIP2.008759_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008759
Chromosome:chromosome 16
Location:4336857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668800 MTA4 Predicted protein; (1 of 2) PTHR24032:SF25 - SPORE COAT PROTEIN SP85 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGACGCGTGGCCGCTGTCCCTGCCCCGGCATACACACACGCGACAC
Internal bar code:CGGTGCATTAACTTTGGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2271
LEAP-Seq percent confirming:84.8101
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACTGTGACCTCCACCTG
Suggested primer 2:ACAGCGGCCACGATACATAG