Insertion junction: CLIP2.008764_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008764
Chromosome:chromosome 6
Location:7988854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304600 (1 of 1) PTHR22778:SF18 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACTGAACTGAGGTGATGACTTGATGGCACTCAAGGTATCGTATTGC
Internal bar code:GTGATGGCGGCAATCCCGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1375
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACGGCGATGGATTACC
Suggested primer 2:CGCCGACAATGCTTTATGGG