Insertion junction: CLIP2.008764_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008764
Chromosome:chromosome 6
Location:7988854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304600 (1 of 1) PTHR22778:SF18 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCTTCCACGTCAGTCTTCTGGAGGCGGTCGCATCCCCTGCCGTCGCAT
Internal bar code:GTGATGGCGGCAATCCCGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGACAATGCTTTATGGG
Suggested primer 2:TGCTACGGCGATGGATTACC