Insertion junction: CLIP2.008769_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008769
Chromosome:chromosome 7
Location:1266538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321951 NRAMP2 Manganese/metal transporter, NRAMP homolog; (1 of 2) PTHR11706//PTHR11706:SF33 - MANGANESE TRANSPORTER // NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTCGACAGGGGAGGCCCGGCCAGTCTTCCGGAGGCAAACGCAACCAT
Internal bar code:GGGTAGATCCGGGGGAGAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTGTGCTGGCTTTTCGC
Suggested primer 2:CAAGCTCTCCCGCCTATGAG