Insertion junction: CLIP2.008769_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008769
Chromosome:chromosome 7
Location:1266538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321951 NRAMP2 Manganese/metal transporter, NRAMP homolog; (1 of 2) PTHR11706//PTHR11706:SF33 - MANGANESE TRANSPORTER // NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCTCCCAGAAATGTCAGCGGACGGCTTGAGCGCCGAGGTTGGCACTT
Internal bar code:TTAATTAGTGCCTTTTCTACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2087
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTCTCCCGCCTATGAG
Suggested primer 2:TTTCTGTGCTGGCTTTTCGC