Insertion junction: CLIP2.008776_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008776
Chromosome:chromosome 9
Location:4416067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400478 DIV31 phosphatidylinositol 4-phosphate 5-kinase; (1 of 1) PTHR23086:SF8 - PROTEIN PPK-2 3'UTR
Cre09.g400516 (1 of 6) K04710 - ceramide synthetase (CERS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCAAGCCACAACCCACCGCTCAGCGCCCGAACCCCAGCCCCCCAAAC
Internal bar code:GCGGTTAACGGGCCGGGAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGGAGGGAGGAGGACTG
Suggested primer 2:GCCTGAGACTGTGCTTGACT