Insertion junction: CLIP2.008782_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008782
Chromosome:chromosome 7
Location:2632159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330400 KCN1 (1 of 1) K04886 - potassium voltage-gated channel Shab-related subfamily B member 2 (KCNB2); Six-transmembrane domain potassium channel alpha subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAAAGCGACGCAGAGCCCACCTGCAGCGCGCTCCCCGACAGCCCCTT
Internal bar code:GGGCTTGTATTGCGGGGACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2578
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCTGCTGATGACTGAGT
Suggested primer 2:AGCGCGTCCTTATCTAGTGC