Insertion junction: CLIP2.008783_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008783
Chromosome:chromosome 15
Location:902630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640100 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGCGATACCAAAACGACAAATCCTCTGGCGGCCGTTCGACTTTAATC
Internal bar code:TAGCTCCAACGTTCTGACTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3060
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTCGTTTGCAGAACCTA
Suggested primer 2:ACACACAGCTGACTCACTCG