Insertion junction: CLIP2.008789_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008789
Chromosome:chromosome 9
Location:2545324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392750 (1 of 1) PTHR10972:SF45 - OXYSTEROL-BINDING PROTEIN 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCATTCTCAGAATTACGGCGATCGATCCTCACGACGCGGGCGGCGAGG
Internal bar code:CTTGGGATGGTTGTTTGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:355
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCAGGCTGTTGTACTC
Suggested primer 2:TCGCGTCGTTCTCTTTCACA