Insertion junction: CLIP2.008789_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008789
Chromosome:chromosome 9
Location:2545325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392750 (1 of 1) PTHR10972:SF45 - OXYSTEROL-BINDING PROTEIN 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGAAACGGCGCGTCAGCGCGCGATTGTGCGAATAAACATATGAGCT
Internal bar code:GTAAAGATGAGGTGTACCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2524
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGTCGTTCTCTTTCACA
Suggested primer 2:ACCAGCAGGCTGTTGTACTC