Insertion junction: CLIP2.008790_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008790
Chromosome:chromosome 5
Location:3026859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g231000 CSA5 Chlorophyceae-specific gene family A protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATATCACTGAGATGGGACAGACCTGGGGGACGTTGAAAGAACCATGTC
Internal bar code:ACGTCGGCTAATGGGGCCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1525
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGTAAGCTGTCCGTCC
Suggested primer 2:CAGTGTGATGCGTTTTGCCA