Insertion junction: CLIP2.008804_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008804
Chromosome:chromosome 16
Location:794312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690700 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGAGGACAGCCCAGTCTGGTGGCGTCCCGCGGGCATTTGCTGGGGAA
Internal bar code:CATATTAGGGGTTATTTCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1947
LEAP-Seq percent confirming:89.5522
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTGGACGAGCTGAACA
Suggested primer 2:CTCCTCTCTCCTTCCCTGCT