Insertion junction: CLIP2.008805_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008805
Chromosome:chromosome 5
Location:2117983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236907 (1 of 1) IPR000572//IPR014720 - Oxidoreductase, molybdopterin-binding domain // Double-stranded RNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCAGCAGGGCGCAGCAGGCGCAGCCCATGCTGATGGCGGCGGCGGC
Internal bar code:CTTATTTCTCGGGGATTAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTCCCCATCAGCAAAT
Suggested primer 2:GAGGGATGAGTCTGGGTCCT