Insertion junction: CLIP2.008806_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008806
Chromosome:chromosome 5
Location:2698246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCTGGTTGCCCCTGCCGCCGCCAATGCCTCCGACTCCACCCCCGCCT
Internal bar code:TGTGCTCGGGGTCGGGAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:912
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGTCAGCTGAATGGTG
Suggested primer 2:CTGCCGCAACTACACCTACA