Insertion junction: CLIP2.008809_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008809
Chromosome:chromosome 9
Location:3252605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394880 (1 of 1) K16810 - TBCC domain-containing protein 1 (TBCCD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTTAAGGAGTGAAGGCGTAGCCAGGTACAGTAGCATTCATGCAAACG
Internal bar code:AGATAGGGTTCCAGTAATCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1019
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGGCACTTCACTTCAT
Suggested primer 2:ATGGCTACCGGTAGTGAGGT