Insertion junction: CLIP2.008811_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008811
Chromosome:chromosome 16
Location:6350320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675700 BLZ21 (1 of 2) IPR000104//IPR004827 - Antifreeze protein, type I // Basic-leucine zipper domain; bZIP transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGTACGTGCATTGGTCTGGCCGTCTGGAGATCGATGTGGCCGTCTGGC
Internal bar code:CCCTTTTAAATCTTTCGATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:902
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCGTCGTCATCCGTGTC
Suggested primer 2:GCTCCTTTACTCGCAGCTCA