Insertion junction: CLIP2.008823_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008823
Chromosome:chromosome 7
Location:5858154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353750 MMP10 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACCAGGTGGGAGTGGGTGAAGGTGGCATAGGTGGTGGCTCCCAGCTT
Internal bar code:GTAAGTAACGAGAAAGGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1428
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCACAGCTATGGCGAGG
Suggested primer 2:TATCCAACCCGCCTAGACCA