Insertion junction: CLIP2.008826_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008826
Chromosome:chromosome 8
Location:2769793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373550 (1 of 1) K01515 - ADP-ribose pyrophosphatase (nudF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGATTCGGCCTTGAAGTGGAGGGGAGGTGGCAGGGATTGGCGTGACAG
Internal bar code:TTTTCATGTGTTATGATAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:177
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGCAAGTGTGTGAGTG
Suggested primer 2:TCTTCATCTGCACCCACGAC