Insertion junction: CLIP2.008828_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008828
Chromosome:chromosome 13
Location:2244673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578451 TSL1 (1 of 2) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase; Leucyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAACCCAAGACCCAGAGGGGTCGAGGTGATGGCATTCGGGACAGGGGA
Internal bar code:ATATATGATCAATCTTTCGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:303
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCAGGTCGTACAGAACC
Suggested primer 2:TACCAACATGCCTGGCTGAG