Insertion junction: CLIP2.008830_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008830
Chromosome:chromosome 2
Location:2250011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090000 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCACCGTCGTCAGGTCTCCGTACGTGCTGCTCAGCTGAAGTGCAGCA
Internal bar code:GTCTGCTGGATATGTCGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGAGCCATATTGGACGCT
Suggested primer 2:GCCTTTACAAAGCTGGCACC