Insertion junction: CLIP2.008831_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008831
Chromosome:chromosome 12
Location:9458492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540850 (1 of 1) IPR009031 - Carbohydrate binding module family 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCTGACCAGGCACGTCCAGACACGCACGCACGCACCTCGGCCGTTCT
Internal bar code:TATGCATTACGACCATGGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1513
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:76
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGCCTTATGAGGGGTGC
Suggested primer 2:CACGAGTCCAGGCATGTTCT