Insertion junction: CLIP2.008854_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008854
Chromosome:chromosome 6
Location:8032571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304913 (1 of 14) PF01476 - LysM domain (LysM) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCAGCACGACGACATTGGGGGGCAGCAGAACGCGCGGAGACCCGCC
Internal bar code:GAGACACGACTTCACTACTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3138
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTCATCTTGCGTGCAG
Suggested primer 2:AGTTTAGGCGCGTGATGGAA