Insertion junction: CLIP2.008859_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008859
Chromosome:chromosome 7
Location:4044087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340400 RSP17 Radial Spoke Protein 17; (1 of 1) IPR000104//IPR029016 - Antifreeze protein, type I // GAF domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCTTCCTCCGCAGCCCTTCCACAGAGGGCCCTCCCAAGCCCCGCCCC
Internal bar code:TGCCGTCGTCGTTGAGTGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTGGAATTGTGGGCTGG
Suggested primer 2:AAGCGGTAAGAAGGAAGGGC