Insertion junction: CLIP2.008863_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008863
Chromosome:chromosome 4
Location:2489546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222050 (1 of 3) K16489 - protein SFI1 (SFI1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGGATGCTACTGCTGCTGTGGTGTGCGGTGGCAGCATGCGTGGCCT
Internal bar code:GGGCTTATAGACTTAGGTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1455
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TATCTGGCATTGGGGCTTGG
Suggested primer 2:GCTCCAACTCCTCCAACTCC