Insertion junction: CLIP2.008864_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008864
Chromosome:chromosome 3
Location:5519208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184950 MAW3 Membrane-associated hydroxyproline-rich glycoprotein 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTATGGCGATGCCCTGTGGGGCCCTCCTCCCTTGGACGTGGTCGCCCCT
Internal bar code:AATCGTGCTTCAAGTTAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:83.7838
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCAGGGTCGAGTACAGC
Suggested primer 2:CTGGAGGCTGTCTTCAACGT