Insertion junction: CLIP2.008866_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008866
Chromosome:chromosome 10
Location:3171164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441800 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTAGTGAAATGCTGTGCACCCCAGCTGACGCGCCGGACTGTTGTACTT
Internal bar code:TCCTGGAATCAGAGCTATAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6172
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGCTCACCAAGTTACAC
Suggested primer 2:TGACAACGCTTGGCCATACT