Insertion junction: CLIP2.008868_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008868
Chromosome:chromosome 2
Location:4140875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041505

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTTTGGTGATTCATGATTTCTTCATCTATCCACCTGTTAGCACCCGG
Internal bar code:ATGTCACGTAGAGGGGAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4680
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACCCATAGCCCCCAATG
Suggested primer 2:ATACCTGCAACCCTCCTTGC