Insertion junction: CLIP2.008883_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008883
Chromosome:chromosome 9
Location:427318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g749547 (1 of 1) PF07510 - Protein of unknown function (DUF1524) (DUF1524) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCCGCACGGTCTCCAGCAGCTTGGCAGTGCCTGTCTGCAGGGGCCG
Internal bar code:GTTGTTGTGTCATCGTAGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:391
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCAATCCTCGCCGACACAAA
Suggested primer 2:GAACACGACGGCTATCGCTA