Insertion junction: CLIP2.008886_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008886
Chromosome:chromosome 2
Location:2857686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094750 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCAGAGCTTTGCACGCCTCACTTTCATGAACCACGTTTTGATTGAAT
Internal bar code:GTAAGGGGTACGTAACTAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1690
LEAP-Seq percent confirming:71.6667
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGAAACACCGCAAACCC
Suggested primer 2:CGCGGCTGAATGTTAGAAGC