Insertion junction: CLIP2.008893_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008893
Chromosome:chromosome 17
Location:1766071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708850 (1 of 226) IPR012337 - Ribonuclease H-like domain CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCGGGATGCGGGAACACAGGCGCATACCGTACGTTACTACCGAAGG
Internal bar code:AATGGGTTATGGGGTACCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTTGTTCCCTGGCCTGT
Suggested primer 2:CTAGCAACCCTAGCTGGCTC