Insertion junction: CLIP2.008894_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008894
Chromosome:chromosome 10
Location:589836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801104 (1 of 1) IPR000104//IPR003072//IPR004333 - Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTATGCTGGCTCTGTGCAGTCAGTACAGCGCCTTCGTGACGGCCATGC
Internal bar code:ATTGCTGTTACGCATAGTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2461
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTGATCCTCATCCATGC
Suggested primer 2:CCGTGATGGTACCGGTATGG