Insertion junction: CLIP2.008895_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008895
Chromosome:chromosome 9
Location:5467685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTGCGAATGGCGGGAAGCCCGGCGCAGGTGGTGCCGAGCGACAGGCT
Internal bar code:AAACTGGCAACCGTCAACTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1812
LEAP-Seq percent confirming:91.8033
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCTACGAGACGAGAGC
Suggested primer 2:TCCGCTAGCCCTTTTGACTG