Insertion junction: CLIP2.008898_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008898
Chromosome:chromosome 11
Location:2020830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467765 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGGCAGGCGCAGCTTTGGGTGGCCGCCCGGAGGCGGGCCTGCGACAG
Internal bar code:AAAGTGGAAAGCAGCATGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTAGCAATGCCCGCAATC
Suggested primer 2:CACATCTCCACCACTGCTGT